This is the community page for the EpiExplorer project. 

Here you can tell us how can we make EpiExplorer more useful to you. Feel free to suggest new features, datasets, visualizations or vote for features suggested by other users. 


Bug reports are also eagerly anticipated, especially on Friday night


Tell us how to make it better. We'll listen

+15
Yassen 4 years ago • updated by Albrecht 4 years ago 0
If the score column contains missing values, the corresponding regions can be (or are automatically) filtered out. Missing values are recognized by empty strings, NA, n/a, or something similar.
Answer
Albrecht 4 years ago

Do you mean "filtered out" by removing them?

+7
Anonymous 5 years ago • updated by Halachev 4 years ago 1

Make possible to upload and annotate only a set of gene identifiers

Feature
Answer
Halachev 4 years ago

+7
Completed
Halachev 5 years ago • updated 5 years ago 0
Genome Feature
+5
Completed
Halachev 5 years ago • updated 3 years ago 0
Genome Feature
+4
Halachev 5 years ago • updated 3 years ago 0
Visualization Feature
+3
Anonymous 3 years ago 0

The server does a great job by calculating the overlaps with ENCODE data and the web interface is adequate for browsing results. However, as soon as one wants to perform some more serious analysis on the overlap results, the web interface becomes a nuisance.  It would be very useful if it would be possible to download all the overlap results as a archive of csv files. 

+3
Anonymous 5 years ago • updated 3 years ago 0
Currently the software allows only one reference to be compared to the current set of regions. We suggest to allow up to five references as this will make it more easy to discretize numeric scores and to follow trends. On the other hand 5 is a compromise number as it will still allow to visualize most plots nicely.
+2
Anonymous 5 years ago • updated 3 years ago 0
Currently at every view the user can export the processed table that represents the view data and also the list of current regions.

It would be useful if he can export the current set of regions with full annotated data from the view for every region
User interface
+2
Started
Halachev 5 years ago • updated 5 years ago 0
Show source of the data, short description of the data, date on which it was obtained, method via which it was processed etc
Visualization Feature
+2
Started
Anonymous 5 years ago • updated by Halachev 4 years ago 0
Visualization Feature
Answer
Halachev 4 years ago